Tutorial 135 topics

Issues about the Martini tutorial

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Question about the charge and mass of beads. Topic started 2 years 10 months ago, by 若水无风 Last Post 2 years 9 months ago by 若水无风	Replies:7 Views:2157	Last Post by 若水无风 2 years 9 months ago
"Parametrizing a small molecule" tutorial missing spc162.gro Topic started 2 years 10 months ago, by jlillard Last Post 2 years 10 months ago by riccardo	Replies:1 Views:1608	Last Post by riccardo 2 years 10 months ago
dna-tutorial-martinize-dna.py error Topic started 3 years 4 months ago, by bayıl Last Post 3 years 4 months ago by peterkroon	Replies:2 Views:1903	Last Post by peterkroon 3 years 4 months ago
lipids with the lipidome tutorial Topic started 3 years 5 months ago, by atefeh.ghlzd Last Post 3 years 5 months ago by vainikka	Replies:1 Views:2029	Last Post by vainikka 3 years 5 months ago
starting the simulaion Topic started 3 years 6 months ago, by atefeh.ghlzd Last Post 3 years 6 months ago by atefeh.ghlzd	Replies:2 Views:2234	Last Post by atefeh.ghlzd 3 years 6 months ago
Protein-ligand Topic started 4 years 1 month ago, by imankatouzian Last Post 3 years 7 months ago by riccardo	Replies:6 Views:2541	Last Post by riccardo 3 years 7 months ago
Visualization using VMD (Self-assembly of functionalized alkanes on a graphite) Topic started 3 years 8 months ago, by Daisuke Last Post 3 years 8 months ago by Daisuke	Replies:1 Views:3094	Last Post by Daisuke 3 years 8 months ago
Self-assembly of functionalized alkanes on a graphite surface Topic started 3 years 8 months ago, by Daisuke Last Post 3 years 8 months ago by Daisuke	Replies:4 Views:2123	Last Post by Daisuke 3 years 8 months ago
Equilibration not progressing at all Topic started 3 years 9 months ago, by darrenphua Last Post 3 years 9 months ago by darrenphua	Replies:0 Views:1679	Last Post by darrenphua 3 years 9 months ago
MARTINI for cyclodextrins Topic started 3 years 9 months ago, by darrenphua Last Post 3 years 9 months ago by darrenphua	Replies:2 Views:1490	Last Post by darrenphua 3 years 9 months ago
polyelectrolyte gmx distance failing Topic started 3 years 10 months ago, by mboy@seas.upenn.edu Last Post 3 years 10 months ago by mboy@seas.upenn.edu	Replies:2 Views:1726	Last Post by mboy@seas.upenn.edu 3 years 10 months ago
martinize-dna.py Topic started 4 years 1 week ago, by Fondyffendof Last Post 4 years 4 days ago by Fondyffendof	Replies:3 Views:1849	Last Post by Fondyffendof 4 years 4 days ago
backmap problem: New molecule (ligand) (Updated) Topic started 6 years 10 months ago, by albumns Last Post 4 years 1 week ago by bhupendra123	Replies:8 Views:5518	Last Post by bhupendra123 4 years 1 week ago
pbc box Topic started 4 years 1 month ago, by imankatouzian Last Post 4 years 1 month ago by riccardo	Replies:3 Views:1981	Last Post by riccardo 4 years 1 month ago
solvate- water out of box? Topic started 4 years 1 month ago, by imankatouzian Last Post 4 years 1 month ago by imankatouzian	Replies:0 Views:1440	Last Post by imankatouzian 4 years 1 month ago
PEG Tutorial - Error Calculating Bond Distances Topic started 4 years 3 months ago, by TravisM Last Post 4 years 2 months ago by riccardo	Replies:4 Views:2158	Last Post by riccardo 4 years 2 months ago
Why I got water in the centre with DPPC on the two sides? Topic started 5 years 3 months ago, by lanselibai Last Post 4 years 3 months ago by riccardo	Replies:5 Views:2104	Last Post by riccardo 4 years 3 months ago
./do-order-gmx5.py analysis Topic started 4 years 5 months ago, by cm Last Post 4 years 5 months ago by cm	Replies:0 Views:1752	Last Post by cm 4 years 5 months ago
bitcoin coin mixer Topic started 7 years 4 months ago, by roshanak Last Post 4 years 6 months ago by riccardo	Replies:7 Views:10.6k	Last Post by riccardo 4 years 6 months ago
how to place protein at a certain distance away from the membrane Topic started 4 years 8 months ago, by cm Last Post 4 years 7 months ago by riccardo	Replies:4 Views:1736	Last Post by riccardo 4 years 7 months ago

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General Purpose Coarse-Grained Force Field

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Tutorial 135 topics