normal Mapping lipids

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1 year 7 months ago #7358 by almeida
Mapping lipids was created by almeida
Hello all,

I want to map some lipids with backward.py and I need itp files for the atomistic models. I downloaded itp files from www.fos.su.se/~sasha/SLipids/Downloads.html for DPPE, POPE, DPPG, DOPG, POPG, but I can't find atomistic topologies for DVPE, DVPG, CDL0, CDL1 and CDL2. Can you tell me where to find atomistic topologies for these last lipids?

Thanks in advance

Regards

Yasser

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1 year 6 months ago #7391 by riccardo
Replied by riccardo on topic Mapping lipids
Have you carefully looked in the literature whether there are available atomistic models for those lipids? If there aren't, then you will have do build them yourself - probably using as starting point similar lipids for which models are available in your favourite atomistic force field.

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