- Posts: 12
itp file for DSPC lipid molecule
- sagar
- Topic Author
- Offline
- Fresh Boarder
Less
More
4 years 6 months ago #8266
by sagar
itp file for DSPC lipid molecule was created by sagar
I got itp file from the website of martini, tutorials for bilayer self-assembly. Name of the file is martini_v2.0_lipid.itp . it contains required parameter for other lipid molecule as well. so Can i use this .itp file only for DSPC bilayer formation Removing the part of the other molecules?
I have given the url where that file is available in bilayer_tutorial.zip
http://cgmartini.nl/index.php/tutorials-general-introduction/bilayers
Thank you.
I have given the url where that file is available in bilayer_tutorial.zip
http://cgmartini.nl/index.php/tutorials-general-introduction/bilayers
Thank you.
Please Log in or Create an account to join the conversation.
- peterkroon
- Offline
- Gold Boarder
Less
More
- Posts: 210
4 years 6 months ago #8268
by peterkroon
Replied by peterkroon on topic itp file for DSPC lipid molecule
Hi Sagar,
You can even leave the rest of the file as is. Just make sure your .top file only mentions the molecules you're interested in. Have a look at the Gromacs manual or tutorials for more info.
Peter
You can even leave the rest of the file as is. Just make sure your .top file only mentions the molecules you're interested in. Have a look at the Gromacs manual or tutorials for more info.
Peter
Please Log in or Create an account to join the conversation.
Time to create page: 0.090 seconds