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  5. Problem : g_membed error

unanswered Problem : g_membed error

  • Luca
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8 years 2 months ago - 8 years 2 months ago #5379 by Luca
Problem : g_membed error was created by Luca
Hi, i get a warning when i try to use Gromacs g_membed_d to embed a martini protein into a membrane+solvent martni system.

The number of growth steps (-nxy + -nz) is larger than the number of steps in the tpr.
If you are sure, you can increase maxwarn.

If i add -maxwarn 1 and ignore the warning the protein result is terrible

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how can i embed the protein in the right way, having the protein in the center of the membrane.

I followed this guide
manual.gromacs.org/archive/4.6.7/online/g_membed.html
Last edit: 8 years 2 months ago by Luca.

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  1. Force Fields
  3. Proteins
  5. Problem : g_membed error
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