normal multiple chain

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1 year 10 months ago #7248 by albumns
multiple chain was created by albumns
Hello,

I've got two different chains (two different proteins) for my simulated system and I would like to use cg_secondary_structure.tcl to assign the secondary structure for each of them. I found the following command as mentioned in tutorial:

cg_helix {{5 48} {120 146}} -hlxmethod "cylinder" -hlxcolor "lime" -hlxrad 2.5
cg_sheet {} -shtfilled "no" -ssdump protein.dat -shtarrowthick 0.4

I am just wondering how shall we specify the chain information for this command?

Thank you very much
Albert

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1 year 10 months ago #7256 by albumns
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