Nucleotides 38 topics

Everything that has to do with the Martini extension to nucleotides.

Subject	Replies / Views	Last Post
Protein RNA complexes Topic started 8 years 3 months ago, by harikk369 Last Post 2 months 2 weeks ago by manoj2410	Replies:4 Views:5139	Last Post by manoj2410 2 months 2 weeks ago
Nucleic acids with Martini3 Topic started 4 months 3 weeks ago, by sayantan0510 Last Post 4 months 3 weeks ago by sayantan0510	Replies:0 Views:615	Last Post by sayantan0510 4 months 3 weeks ago
RNA to martini coarse grain conversion Topic started 3 years 5 months ago, by daniloboskovic Last Post 5 months 1 week ago by kang	Replies:2 Views:1936	Last Post by kang 5 months 1 week ago
Why is the 5'-terminus of MARTINI DNA uncharged? Topic started 5 months 1 week ago, by suhas Last Post 5 months 1 week ago by suhas	Replies:0 Views:189	Last Post by suhas 5 months 1 week ago
Martini2 RNA Backbone Dihedrals duplicate atom index error Topic started 8 months 1 week ago, by subha Last Post 8 months 1 week ago by subha	Replies:0 Views:860	Last Post by subha 8 months 1 week ago
Charged beads Topic started 8 months 2 weeks ago, by GhazalehYA Last Post 8 months 1 week ago by GhazalehYA	Replies:2 Views:500	Last Post by GhazalehYA 8 months 1 week ago
Protonated nucleic acids Topic started 9 months 1 week ago, by Panczyk Last Post 9 months 1 week ago by Panczyk	Replies:0 Views:539	Last Post by Panczyk 9 months 1 week ago
martini_v2.1-dna.itp vs martini_v2.0.itp Topic started 9 months 2 weeks ago, by Guruge Last Post 9 months 2 weeks ago by Guruge	Replies:6 Views:525	Last Post by Guruge 9 months 2 weeks ago
RNA secondary structure during martinize_nucleotide.py Topic started 1 year 3 weeks ago, by mandar Last Post 1 year 3 weeks ago by mandar	Replies:0 Views:2435	Last Post by mandar 1 year 3 weeks ago
Stiff RNA + ElneDyn for large RNA Topic started 1 year 3 weeks ago, by mandar Last Post 1 year 3 weeks ago by mandar	Replies:1 Views:551	Last Post by mandar 1 year 3 weeks ago
Martini 3 and RNA Topic started 1 year 4 weeks ago, by chornby Last Post 1 year 4 weeks ago by chornby	Replies:0 Views:695	Last Post by chornby 1 year 4 weeks ago
Martini error Keyerror B + ds-RNA Topic started 1 year 1 month ago, by mandar Last Post 1 year 1 month ago by mandar	Replies:0 Views:683	Last Post by mandar 1 year 1 month ago
martinize script for RNA with distance greater than cutoff Topic started 1 year 2 months ago, by mandar Last Post 1 year 2 months ago by mandar	Replies:0 Views:1600	Last Post by mandar 1 year 2 months ago
Building 2.2 kb ssDNA Topic started 1 year 2 months ago, by Junb Last Post 1 year 2 months ago by Junb	Replies:0 Views:909	Last Post by Junb 1 year 2 months ago
Nucleic acid simulation with Martini3 Topic started 1 year 7 months ago, by devP Last Post 1 year 3 months ago by Nguyen	Replies:2 Views:2429	Last Post by Nguyen 1 year 3 months ago
Martini tutorials: DNA Topic started 5 years 6 months ago, by ChristinaL Last Post 1 year 8 months ago by Abhi	Replies:1 Views:4509	Last Post by Abhi 1 year 8 months ago
Martini dsRNA tutorial setup crashing for long runs. Topic started 2 years 5 months ago, by ibrahim Last Post 2 years 5 months ago by ibrahim	Replies:3 Views:2914	Last Post by ibrahim 2 years 5 months ago
MD run failing Topic started 2 years 7 months ago, by Fondyffendof Last Post 2 years 6 months ago by bart	Replies:12 Views:1969	Last Post by bart 2 years 6 months ago
CG mapping of a rosette nanotube Topic started 2 years 9 months ago, by karra.v Last Post 2 years 9 months ago by karra.v	Replies:0 Views:1610	Last Post by karra.v 2 years 9 months ago
Building CG DNA using martinize-dna.py Topic started 8 years 8 months ago, by doa.hawamdeh Last Post 2 years 9 months ago by GhazalehYA	Replies:4 Views:5725	Last Post by GhazalehYA 2 years 9 months ago

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Nucleotides 38 topics