Nucleotides 21 topics

Everything that has to do with the Martini extension to nucleotides.

Subject	Replies / Views	Last Post
RDD question Topic started 2 days 10 hours ago, by daniloboskovic Last Post 2 days 10 hours ago by daniloboskovic	Replies:0 Views:10	Last Post by daniloboskovic 2 days 10 hours ago
Elastic network for complex rna strucutres Topic started 2 weeks 3 days ago, by ibrahim Last Post 2 days 10 hours ago by daniloboskovic	Replies:1 Views:45	Last Post by daniloboskovic 2 days 10 hours ago
RNA to martini coarse grain conversion Topic started 1 month 1 day ago, by daniloboskovic Last Post 3 weeks 6 days ago by daniloboskovic	Replies:1 Views:52	Last Post by daniloboskovic 3 weeks 6 days ago
How to retain HETATM? Topic started 4 months 5 days ago, by LucianF Last Post 3 months 3 weeks ago by peterkroon	Replies:6 Views:205	Last Post by peterkroon 3 months 3 weeks ago
RNA helix Topic started 5 months 3 weeks ago, by dariush Last Post 5 months 1 week ago by dariush	Replies:8 Views:270	Last Post by dariush 5 months 1 week ago
Problem generating RNA topology - bases not recognized by martinize Topic started 11 months 1 week ago, by sajjad.ir Last Post 11 months 3 days ago by ifaustino	Replies:2 Views:881	Last Post by ifaustino 11 months 3 days ago
Martini tutorials: DNA Topic started 2 years 2 months ago, by ChristinaL Last Post 2 years 2 months ago by ChristinaL	Replies:0 Views:2157	Last Post by ChristinaL 2 years 2 months ago
Martini parameters for RNA Topic started 3 years 2 months ago, by bt12d026 Last Post 2 years 2 months ago by ifaustino	Replies:10 Views:4926	Last Post by ifaustino 2 years 2 months ago
Topology for cyclic systems Topic started 2 years 10 months ago, by mohsen Last Post 2 years 8 months ago by peterkroon	Replies:1 Views:1937	Last Post by peterkroon 2 years 8 months ago
Protein RNA complexes Topic started 4 years 11 months ago, by harikk369 Last Post 2 years 10 months ago by jaakko	Replies:3 Views:3027	Last Post by jaakko 2 years 10 months ago
DNA with polarized water Topic started 3 years 2 weeks ago, by shibalagu Last Post 2 years 11 months ago by shibalagu	Replies:2 Views:2351	Last Post by shibalagu 2 years 11 months ago
Holliday Junction Conformational Changes? Topic started 3 years 1 week ago, by jonasori Last Post 2 years 11 months ago by jonasori	Replies:2 Views:2004	Last Post by jonasori 2 years 11 months ago
DNA Junction Blowing Up Topic started 3 years 1 month ago, by jonasori Last Post 3 years 1 month ago by jaakko	Replies:10 Views:4084	Last Post by jaakko 3 years 1 month ago
soft network problem Topic started 3 years 10 months ago, by wzhwei173 Last Post 3 years 10 months ago by jaakko	Replies:3 Views:2997	Last Post by jaakko 3 years 10 months ago
DNA/protein complex Topic started 3 years 11 months ago, by Hegedus Last Post 3 years 10 months ago by jaakko	Replies:5 Views:3307	Last Post by jaakko 3 years 10 months ago
martini DNA system with polarizable water Topic started 3 years 11 months ago, by wzhwei173 Last Post 3 years 11 months ago by wzhwei173	Replies:2 Views:2473	Last Post by wzhwei173 3 years 11 months ago
DNA deforms in simulation Topic started 3 years 11 months ago, by wzhwei173 Last Post 3 years 11 months ago by jaakko	Replies:1 Views:2457	Last Post by jaakko 3 years 11 months ago
rna Topic started 4 years 11 months ago, by ida Last Post 4 years 11 months ago by jaakko	Replies:1 Views:2532	Last Post by jaakko 4 years 11 months ago
holliday dna Topic started 5 years 4 days ago, by dave Last Post 5 years 2 days ago by dave	Replies:3 Views:3023	Last Post by dave 5 years 2 days ago
Building CG DNA using martinize-dna.py Topic started 5 years 3 months ago, by doa.hawamdeh Last Post 5 years 3 months ago by jaakko	Replies:3 Views:3162	Last Post by jaakko 5 years 3 months ago

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Coarse Grain Forcefield for Biomolecules

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Nucleotides 21 topics