Nucleotides 25 topics

Everything that has to do with the Martini extension to nucleotides.

Subject	Replies / Views	Last Post
Martini dsRNA tutorial setup crashing for long runs. Topic started 6 months 3 weeks ago, by ibrahim Last Post 6 months 2 weeks ago by ibrahim	Replies:3 Views:1315	Last Post by ibrahim 6 months 2 weeks ago
MD run failing Topic started 8 months 4 weeks ago, by Fondyffendof Last Post 7 months 3 weeks ago by bart	Replies:12 Views:688	Last Post by bart 7 months 3 weeks ago
CG mapping of a rosette nanotube Topic started 10 months 4 weeks ago, by karra.v Last Post 10 months 4 weeks ago by karra.v	Replies:0 Views:512	Last Post by karra.v 10 months 4 weeks ago
Building CG DNA using martinize-dna.py Topic started 6 years 9 months ago, by doa.hawamdeh Last Post 10 months 4 weeks ago by GhazalehYA	Replies:4 Views:4269	Last Post by GhazalehYA 10 months 4 weeks ago
DNA/peptide/lipid Topic started 1 year 1 month ago, by Lati Last Post 1 year 3 days ago by riccardo	Replies:1 Views:744	Last Post by riccardo 1 year 3 days ago
RDD question Topic started 1 year 6 months ago, by daniloboskovic Last Post 1 year 5 months ago by bart	Replies:4 Views:844	Last Post by bart 1 year 5 months ago
Elastic network for complex rna strucutres Topic started 1 year 6 months ago, by ibrahim Last Post 1 year 6 months ago by daniloboskovic	Replies:1 Views:848	Last Post by daniloboskovic 1 year 6 months ago
RNA to martini coarse grain conversion Topic started 1 year 6 months ago, by daniloboskovic Last Post 1 year 6 months ago by daniloboskovic	Replies:1 Views:697	Last Post by daniloboskovic 1 year 6 months ago
How to retain HETATM? Topic started 1 year 10 months ago, by LucianF Last Post 1 year 9 months ago by peterkroon	Replies:6 Views:1071	Last Post by peterkroon 1 year 9 months ago
RNA helix Topic started 1 year 11 months ago, by dariush Last Post 1 year 11 months ago by dariush	Replies:8 Views:1077	Last Post by dariush 1 year 11 months ago
Problem generating RNA topology - bases not recognized by martinize Topic started 2 years 5 months ago, by sajjad.ir Last Post 2 years 5 months ago by ifaustino	Replies:2 Views:1664	Last Post by ifaustino 2 years 5 months ago
Martini tutorials: DNA Topic started 3 years 8 months ago, by ChristinaL Last Post 3 years 8 months ago by ChristinaL	Replies:0 Views:3061	Last Post by ChristinaL 3 years 8 months ago
Martini parameters for RNA Topic started 4 years 8 months ago, by bt12d026 Last Post 3 years 8 months ago by ifaustino	Replies:10 Views:5818	Last Post by ifaustino 3 years 8 months ago
Topology for cyclic systems Topic started 4 years 4 months ago, by mohsen Last Post 4 years 2 months ago by peterkroon	Replies:1 Views:2651	Last Post by peterkroon 4 years 2 months ago
Protein RNA complexes Topic started 6 years 5 months ago, by harikk369 Last Post 4 years 4 months ago by jaakko	Replies:3 Views:3718	Last Post by jaakko 4 years 4 months ago
DNA with polarized water Topic started 4 years 6 months ago, by shibalagu Last Post 4 years 5 months ago by shibalagu	Replies:2 Views:3134	Last Post by shibalagu 4 years 5 months ago
Holliday Junction Conformational Changes? Topic started 4 years 6 months ago, by jonasori Last Post 4 years 5 months ago by jonasori	Replies:2 Views:2674	Last Post by jonasori 4 years 5 months ago
DNA Junction Blowing Up Topic started 4 years 7 months ago, by jonasori Last Post 4 years 7 months ago by jaakko	Replies:10 Views:5169	Last Post by jaakko 4 years 7 months ago
soft network problem Topic started 5 years 4 months ago, by wzhwei173 Last Post 5 years 4 months ago by jaakko	Replies:3 Views:3810	Last Post by jaakko 5 years 4 months ago
DNA/protein complex Topic started 5 years 5 months ago, by Hegedus Last Post 5 years 4 months ago by jaakko	Replies:5 Views:4116	Last Post by jaakko 5 years 4 months ago

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Coarse Grain Forcefield for Biomolecules

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Nucleotides 25 topics