Nucleotides 21 topics

Everything that has to do with the Martini extension to nucleotides.

Subject	Replies / Views	Last Post
RDD question Topic started 3 months 3 days ago, by daniloboskovic Last Post 2 months 3 weeks ago by bart	Replies:4 Views:201	Last Post by bart 2 months 3 weeks ago
Elastic network for complex rna strucutres Topic started 3 months 2 weeks ago, by ibrahim Last Post 3 months 3 days ago by daniloboskovic	Replies:1 Views:217	Last Post by daniloboskovic 3 months 3 days ago
RNA to martini coarse grain conversion Topic started 4 months 2 days ago, by daniloboskovic Last Post 3 months 4 weeks ago by daniloboskovic	Replies:1 Views:171	Last Post by daniloboskovic 3 months 4 weeks ago
How to retain HETATM? Topic started 7 months 6 days ago, by LucianF Last Post 6 months 4 weeks ago by peterkroon	Replies:6 Views:367	Last Post by peterkroon 6 months 4 weeks ago
RNA helix Topic started 8 months 3 weeks ago, by dariush Last Post 8 months 1 week ago by dariush	Replies:8 Views:407	Last Post by dariush 8 months 1 week ago
Problem generating RNA topology - bases not recognized by martinize Topic started 1 year 2 months ago, by sajjad.ir Last Post 1 year 2 months ago by ifaustino	Replies:2 Views:1073	Last Post by ifaustino 1 year 2 months ago
Martini tutorials: DNA Topic started 2 years 5 months ago, by ChristinaL Last Post 2 years 5 months ago by ChristinaL	Replies:0 Views:2355	Last Post by ChristinaL 2 years 5 months ago
Martini parameters for RNA Topic started 3 years 5 months ago, by bt12d026 Last Post 2 years 5 months ago by ifaustino	Replies:10 Views:5221	Last Post by ifaustino 2 years 5 months ago
Topology for cyclic systems Topic started 3 years 1 month ago, by mohsen Last Post 2 years 11 months ago by peterkroon	Replies:1 Views:2124	Last Post by peterkroon 2 years 11 months ago
Protein RNA complexes Topic started 5 years 2 months ago, by harikk369 Last Post 3 years 1 month ago by jaakko	Replies:3 Views:3213	Last Post by jaakko 3 years 1 month ago
DNA with polarized water Topic started 3 years 3 months ago, by shibalagu Last Post 3 years 2 months ago by shibalagu	Replies:2 Views:2551	Last Post by shibalagu 3 years 2 months ago
Holliday Junction Conformational Changes? Topic started 3 years 3 months ago, by jonasori Last Post 3 years 2 months ago by jonasori	Replies:2 Views:2188	Last Post by jonasori 3 years 2 months ago
DNA Junction Blowing Up Topic started 3 years 4 months ago, by jonasori Last Post 3 years 4 months ago by jaakko	Replies:10 Views:4393	Last Post by jaakko 3 years 4 months ago
soft network problem Topic started 4 years 1 month ago, by wzhwei173 Last Post 4 years 1 month ago by jaakko	Replies:3 Views:3219	Last Post by jaakko 4 years 1 month ago
DNA/protein complex Topic started 4 years 2 months ago, by Hegedus Last Post 4 years 1 month ago by jaakko	Replies:5 Views:3555	Last Post by jaakko 4 years 1 month ago
martini DNA system with polarizable water Topic started 4 years 2 months ago, by wzhwei173 Last Post 4 years 2 months ago by wzhwei173	Replies:2 Views:2665	Last Post by wzhwei173 4 years 2 months ago
DNA deforms in simulation Topic started 4 years 2 months ago, by wzhwei173 Last Post 4 years 2 months ago by jaakko	Replies:1 Views:2637	Last Post by jaakko 4 years 2 months ago
rna Topic started 5 years 2 months ago, by ida Last Post 5 years 2 months ago by jaakko	Replies:1 Views:2706	Last Post by jaakko 5 years 2 months ago
holliday dna Topic started 5 years 3 months ago, by dave Last Post 5 years 3 months ago by dave	Replies:3 Views:3261	Last Post by dave 5 years 3 months ago
Building CG DNA using martinize-dna.py Topic started 5 years 6 months ago, by doa.hawamdeh Last Post 5 years 6 months ago by jaakko	Replies:3 Views:3382	Last Post by jaakko 5 years 6 months ago

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Coarse Grain Forcefield for Biomolecules

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Nucleotides 21 topics