1. Force Fields
  3. Other Molecules

Other Molecules 120 topics

Any question about molecules that doesn't fit in the other forums? Post it here.

Subject Replies / Views Last Post
unanswered
other molecules
Topic started 1 day 15 hours ago, by Nada_TAIB
Last Post 1 day 15 hours ago
by Nada_TAIB
Replies:0
Views:15
Last Post by Nada_TAIB
1 day 15 hours ago
normal
Hydration free energy of Lidocaine
Topic started 5 days 11 hours ago, by yogi@martini
Last Post 2 days 18 hours ago
by riccardo
Replies:1
Views:60
Last Post by riccardo
2 days 18 hours ago
unanswered
Ion masses in Martini 3.0
Topic started 1 month 1 week ago, by shalinijr
Last Post 1 month 1 week ago
by shalinijr
Replies:0
Views:226
Last Post by shalinijr
1 month 1 week ago
unanswered
Parametrization for zinc ions in a metalloprotein (MARTINI 3)
Topic started 3 months 3 weeks ago, by fmeireles
Last Post 3 months 3 weeks ago
by fmeireles
Replies:0
Views:604
Last Post by fmeireles
3 months 3 weeks ago
normal
Martini 3 Ions clumping together
Topic started 5 months 2 weeks ago, by AlexBW
Last Post 4 months 3 weeks ago
by AlexBW
Replies:2
Views:614
Last Post by AlexBW
4 months 3 weeks ago
normal
Bond connectivity for Methyl benzoate
Topic started 5 months 2 weeks ago, by shalinijr
Last Post 5 months 2 weeks ago
by shalinijr
Replies:3
Views:407
Last Post by shalinijr
5 months 2 weeks ago
normal
Update to Martini 3 parameters
Topic started 6 months 2 weeks ago, by FJSP22
Last Post 6 months 1 week ago
by FJSP22
Replies:2
Views:529
Last Post by FJSP22
6 months 1 week ago
normal
How to assign bead types and parameters for fructose-1,6-biphosphate
Topic started 7 months 2 days ago, by chandrimaM
Last Post 6 months 3 weeks ago
by MatsMD
Replies:3
Views:470
Last Post by MatsMD
6 months 3 weeks ago
normal
Non-bonded (LJ) parameters for oxygen and carbon dioxide
Topic started 7 months 6 hours ago, by priyakedia
Last Post 6 months 4 weeks ago
by riccardo
Replies:1
Views:399
Last Post by riccardo
6 months 4 weeks ago
unanswered
Martini hybrid model. Want to add volume exclusion beads.
Topic started 8 months 4 weeks ago, by nambinik
Last Post 8 months 4 weeks ago
by nambinik
Replies:0
Views:690
Last Post by nambinik
8 months 4 weeks ago
normal
Modeling polypropylene (PP) sheet
Topic started 1 year 4 weeks ago, by Junb
Last Post 10 months 1 day ago
by Junb
Replies:6
Views:1195
Last Post by Junb
10 months 1 day ago
normal
Martini forcefield parameters for Mg2++ for a glycosylated protein
Topic started 1 year 3 months ago, by zmazhar9
Last Post 11 months 3 weeks ago
by riccardo
Replies:1
Views:594
Last Post by riccardo
11 months 3 weeks ago
normal
Beads for triazine
Topic started 1 year 1 month ago, by marquez
Last Post 1 year 3 weeks ago
by siewert
Replies:1
Views:716
Last Post by siewert
1 year 3 weeks ago
unanswered
FAD protein complex
Topic started 1 year 1 month ago, by kodi_nir
Last Post 1 year 1 month ago
by kodi_nir
Replies:0
Views:543
Last Post by kodi_nir
1 year 1 month ago
unanswered
bond parameters/SASA optimization for a new molecule
Topic started 1 year 1 month ago, by fralav
Last Post 1 year 1 month ago
by fralav
Replies:0
Views:774
Last Post by fralav
1 year 1 month ago
normal
Modelling acids like sulfuric acid (H2SO4)
Topic started 1 year 1 month ago, by xatzman1999
Last Post 1 year 1 month ago
by xatzman1999
Replies:2
Views:609
Last Post by xatzman1999
1 year 1 month ago
normal
Caffeine .itp file
Topic started 1 year 2 months ago, by JBinder
Last Post 1 year 2 months ago
by JBinder
Replies:2
Views:974
Last Post by JBinder
1 year 2 months ago
normal
Martini forcefield parameters for Mg2+ for a glycosylated protein
Topic started 1 year 3 months ago, by zmazhar9
Last Post 1 year 2 months ago
by xavier
Replies:2
Views:985
Last Post by xavier
1 year 2 months ago
normal
PMP membrane
Topic started 1 year 7 months ago, by gvdmm
Last Post 1 year 5 months ago
by riccardo
Replies:3
Views:1698
Last Post by riccardo
1 year 5 months ago
normal
Extending Martini Forcefield to Other Ions
Topic started 1 year 9 months ago, by AditiKhot
Last Post 1 year 9 months ago
by siewert
Replies:1
Views:1630
Last Post by siewert
1 year 9 months ago
  1. Force Fields
  3. Other Molecules
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