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How to build PE surfaces?
- cvieira
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7 years 8 months ago #5795
by cvieira
How to build PE surfaces? was created by cvieira
Hello All,
I am trying to study protein-surface interactions using a Polyethylene surface. I am not quite sure how to do that. I have built lipid surfaces using the martini parameter files given in this website, however, my ultimate goal is not to study protein-lipid interactions. Does anyone know how I can go about an build Polyethylene surfaces using Martini and/or Gromacs?
I appreciate any help on this matter.
I am trying to study protein-surface interactions using a Polyethylene surface. I am not quite sure how to do that. I have built lipid surfaces using the martini parameter files given in this website, however, my ultimate goal is not to study protein-lipid interactions. Does anyone know how I can go about an build Polyethylene surfaces using Martini and/or Gromacs?
I appreciate any help on this matter.
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- xavier
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7 years 7 months ago #5840
by xavier
Replied by xavier on topic How to build PE surfaces?
Building an atomic surface model might be a good start ... then you could design a few mapping of it to use it in Martini.
Did you look at other papers using surfaces in Martini? It might be a couple.
Did you look at other papers using surfaces in Martini? It might be a couple.
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