normal error when making CG representation

  • thu nguyen
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9 years 4 months ago #1331 by thu nguyen
error when making CG representation was created by thu nguyen
Dear All,

When i make cg file by using command
./martinize.py -f pro_mem.pdb -o sys.top -x cg_sys.pdb -dssp /usr/local/bin/dssp -p backbone

the error is
ERROR A problem occured calling /usr/local/bin/dssp.

What can i do to fix this error ?

Thanks and regards,
KT

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9 years 4 months ago #1333 by djurre
Replied by djurre on topic error when making CG representation
Did you check to see if DSSP works by itself? What happens if you type: /usr/local/bin/dssp pro_mem.pdb

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9 years 4 months ago #1336 by thu nguyen
Replied by thu nguyen on topic error when making CG representation
When i type : /usr/local/bin/dssp pro_mem.pdb

the error appears: bash: /usr/local/bin/dssp: cannot execute binary file

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