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How about the 1-4 interaction in MARTINI?
- yongle
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10 years 6 months ago #2075
by yongle
How about the 1-4 interaction in MARTINI? was created by yongle
Hi all,
After some simulations with MARTINI, I'm just curious about how the MARTINI handle 1-4 interactions.
It seems there is no description in the MARTINI force field papers.
Is the 1-4 interactions in MARTINI set to be zero or scaled LJ parameters or using other set of LJ parameters?
Hope your reply. Thanks!
After some simulations with MARTINI, I'm just curious about how the MARTINI handle 1-4 interactions.
It seems there is no description in the MARTINI force field papers.
Is the 1-4 interactions in MARTINI set to be zero or scaled LJ parameters or using other set of LJ parameters?
Hope your reply. Thanks!
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- jaakko
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10 years 6 months ago #2099
by jaakko
Replied by jaakko on topic How about the 1-4 interaction in MARTINI?
Hi yongle,
Since Martini coarse-grains groups of atoms into beads there isn't anything inherently special about 1-4 interactions in Martini the way they are an issue in all-atom force fields. 1-4 interactions are fully included in Martini with the normal parameters.
Since Martini coarse-grains groups of atoms into beads there isn't anything inherently special about 1-4 interactions in Martini the way they are an issue in all-atom force fields. 1-4 interactions are fully included in Martini with the normal parameters.
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10 years 6 months ago #2109
by yongle
Replied by yongle on topic How about the 1-4 interaction in MARTINI?
Thanks!
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