normal How about the 1-4 interaction in MARTINI?

  • yongle
  • yongle's Avatar Topic Author
  • Offline
  • Fresh Boarder
More
10 years 6 months ago #2075 by yongle
Hi all,

After some simulations with MARTINI, I'm just curious about how the MARTINI handle 1-4 interactions.
It seems there is no description in the MARTINI force field papers.
Is the 1-4 interactions in MARTINI set to be zero or scaled LJ parameters or using other set of LJ parameters?

Hope your reply. Thanks!

Please Log in or Create an account to join the conversation.

More
10 years 6 months ago #2099 by jaakko
Replied by jaakko on topic How about the 1-4 interaction in MARTINI?
Hi yongle,

Since Martini coarse-grains groups of atoms into beads there isn't anything inherently special about 1-4 interactions in Martini the way they are an issue in all-atom force fields. 1-4 interactions are fully included in Martini with the normal parameters.

Please Log in or Create an account to join the conversation.

  • yongle
  • yongle's Avatar Topic Author
  • Offline
  • Fresh Boarder
More
10 years 6 months ago #2109 by yongle
Replied by yongle on topic How about the 1-4 interaction in MARTINI?
Thanks!

Please Log in or Create an account to join the conversation.

Time to create page: 0.090 seconds