Tools 311 topics

Scripts, programs and software to use with Martini simulations.

Subject	Replies / Views	Last Post
Martinizing a solvated phospholipid bilayer system Topic started 1 month 2 weeks ago, by SinaSina92 Last Post 1 month 2 weeks ago by bart	Replies:1 Views:816	Last Post by bart 1 month 2 weeks ago
P2 order parameter analysis Topic started 3 months 2 weeks ago, by Junb Last Post 3 months 2 weeks ago by Junb	Replies:0 Views:605	Last Post by Junb 3 months 2 weeks ago
Go-MARTINI3 and protein protein interactions Topic started 6 months 1 week ago, by shaukat_i Last Post 6 months 19 hours ago by adolfom	Replies:1 Views:868	Last Post by adolfom 6 months 19 hours ago
cg_bonds script to back-map my trajectory Topic started 6 months 1 week ago, by anna_banana Last Post 6 months 1 week ago by anna_banana	Replies:0 Views:416	Last Post by anna_banana 6 months 1 week ago
Backmapping after Martini3 Topic started 6 months 1 week ago, by shaukat_i Last Post 6 months 1 week ago by shaukat_i	Replies:0 Views:408	Last Post by shaukat_i 6 months 1 week ago
Sphingomyelin and other lipids in insane.py? Topic started 8 years 10 months ago, by gpantel Last Post 7 months 3 weeks ago by zwy	Replies:4 Views:9140	Last Post by zwy 7 months 3 weeks ago
Truncated heavy chains on antibody using martinize.py Topic started 8 months 7 hours ago, by amjadkchy Last Post 8 months 7 hours ago by amjadkchy	Replies:0 Views:390	Last Post by amjadkchy 8 months 7 hours ago
Martinize2 error in building the system Topic started 8 months 23 hours ago, by kesavan Last Post 8 months 23 hours ago by kesavan	Replies:0 Views:341	Last Post by kesavan 8 months 23 hours ago
Martinize2 error - Building system for 100 chains Topic started 8 months 3 weeks ago, by kesavan Last Post 8 months 3 weeks ago by kesavan	Replies:2 Views:551	Last Post by kesavan 8 months 3 weeks ago
Backward mapping fails with index out of range error Topic started 10 months 1 day ago, by khZhang Last Post 10 months 1 day ago by khZhang	Replies:0 Views:566	Last Post by khZhang 10 months 1 day ago
Backmapping multiple chain systems leads to broken molecules Topic started 11 months 3 weeks ago, by amin_sagar Last Post 11 months 3 weeks ago by amin_sagar	Replies:0 Views:863	Last Post by amin_sagar 11 months 3 weeks ago
Martini & gmx energy Topic started 1 year 1 month ago, by peter Last Post 1 year 1 month ago by peter	Replies:0 Views:965	Last Post by peter 1 year 1 month ago
Looking for charmm AA cholesterol structure matching backward map file Topic started 4 years 1 month ago, by cneale Last Post 1 year 2 months ago by moon	Replies:5 Views:2964	Last Post by moon 1 year 2 months ago
Martinizing cofactors Topic started 1 year 2 months ago, by marcol Last Post 1 year 2 months ago by marcol	Replies:0 Views:733	Last Post by marcol 1 year 2 months ago
initram.sh dependecy error Topic started 1 year 2 months ago, by omkar73 Last Post 1 year 2 months ago by riccardo	Replies:3 Views:728	Last Post by riccardo 1 year 2 months ago
Assignment between atoms and CG beads Topic started 1 year 2 months ago, by FJSP22 Last Post 1 year 2 months ago by FJSP22	Replies:0 Views:624	Last Post by FJSP22 1 year 2 months ago
cg_bonds-v5.tcl Topic started 2 years 5 months ago, by JBinder Last Post 1 year 4 months ago by morris	Replies:7 Views:2707	Last Post by morris 1 year 4 months ago
martinize2 does not recognize RNAs residues Topic started 1 year 4 months ago, by willyef Last Post 1 year 4 months ago by fgrunewald	Replies:1 Views:807	Last Post by fgrunewald 1 year 4 months ago
Martinize trajectory? Topic started 1 year 4 months ago, by mason Last Post 1 year 4 months ago by riccardo	Replies:1 Views:663	Last Post by riccardo 1 year 4 months ago
Insane explote my protein .- Topic started 1 year 6 months ago, by bqAlvii Last Post 1 year 6 months ago by bqAlvii	Replies:0 Views:780	Last Post by bqAlvii 1 year 6 months ago

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Tools 311 topics