Martini Philosophy 42 topics

Why 4-to-1 mapping? Why a limited number of particle types?

Subject	Replies / Views	Last Post
Intramolecular Coulombic interactions Topic started 3 years 5 months ago, by bernardR Last Post 3 years 5 months ago by mnmelo	Replies:3 Views:4686	Last Post by mnmelo 3 years 5 months ago
Coarse grained mapping of nanoparticle Topic started 3 years 5 months ago, by Puangmali Last Post 3 years 5 months ago by mnmelo	Replies:1 Views:2152	Last Post by mnmelo 3 years 5 months ago
About the structure froozening in Martini Topic started 4 years 4 months ago, by xiaoyan_zheng Last Post 4 years 2 weeks ago by xiaoyan_zheng	Replies:2 Views:8249	Last Post by xiaoyan_zheng 4 years 2 weeks ago
GROMACS Topic started 4 years 4 months ago, by doa.hawamdeh Last Post 4 years 4 months ago by xavier	Replies:1 Views:4159	Last Post by xavier 4 years 4 months ago
about secondary structure query Topic started 4 years 5 months ago, by nareshthota Last Post 4 years 4 months ago by xavier	Replies:10 Views:4561	Last Post by xavier 4 years 4 months ago
Van der Waals radius of the bead. Topic started 4 years 8 months ago, by initram Last Post 4 years 8 months ago by initram	Replies:2 Views:7794	Last Post by initram 4 years 8 months ago
need help in running CG simulation Topic started 4 years 9 months ago, by alliki Last Post 4 years 8 months ago by Clement	Replies:1 Views:3839	Last Post by Clement 4 years 8 months ago
CG-MD SIMULATION USING GROMACSHi Topic started 4 years 9 months ago, by doa.hawamdeh Last Post 4 years 9 months ago by Clement	Replies:1 Views:2616	Last Post by Clement 4 years 9 months ago
Why include i, i+2 and i, i+3 LJ interctions? Topic started 4 years 10 months ago, by jsbach Last Post 4 years 10 months ago by jsbach	Replies:0 Views:2435	Last Post by jsbach 4 years 10 months ago
Incoperate Go-poential to Martini Topic started 4 years 10 months ago, by jsbach Last Post 4 years 10 months ago by jsbach	Replies:6 Views:3131	Last Post by jsbach 4 years 10 months ago
Regarding mapping of resonance molecules Topic started 5 years 3 months ago, by satnamphysics Last Post 5 years 2 months ago by satnamphysics	Replies:4 Views:10.4k	Last Post by satnamphysics 5 years 2 months ago
PIP2 parameters Topic started 5 years 4 months ago, by chris_1 Last Post 5 years 4 months ago by siewert	Replies:1 Views:4919	Last Post by siewert 5 years 4 months ago
How to set the bond force constant? Topic started 5 years 5 months ago, by Leliel Last Post 5 years 5 months ago by xavier	Replies:5 Views:4366	Last Post by xavier 5 years 5 months ago
how to mapping triple bond? Topic started 5 years 5 months ago, by always2323 Last Post 5 years 5 months ago by xavier	Replies:1 Views:3495	Last Post by xavier 5 years 5 months ago
How about the 1-4 interaction in MARTINI? Topic started 5 years 6 months ago, by yongle Last Post 5 years 5 months ago by yongle	Replies:2 Views:2551	Last Post by yongle 5 years 5 months ago
Philosophy of the martinilize Topic started 5 years 7 months ago, by Leliel Last Post 5 years 7 months ago by djurre	Replies:15 Views:5089	Last Post by djurre 5 years 7 months ago
when to use polarized water model? Topic started 6 years 1 month ago, by junfeng Last Post 6 years 2 weeks ago by xavier	Replies:1 Views:6217	Last Post by xavier 6 years 2 weeks ago
what is the difference between elastic network model and elnedyn? Topic started 6 years 1 month ago, by junfeng Last Post 6 years 1 month ago by djurre	Replies:1 Views:2055	Last Post by djurre 6 years 1 month ago
error when making CG representation Topic started 6 years 2 months ago, by thu nguyen Last Post 6 years 2 months ago by thu nguyen	Replies:2 Views:3620	Last Post by thu nguyen 6 years 2 months ago
Bonded interactions Topic started 6 years 4 months ago, by Yufeng Last Post 6 years 4 months ago by Yufeng	Replies:2 Views:4256	Last Post by Yufeng 6 years 4 months ago

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Coarse Grain Forcefield for Biomolecules

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Martini Philosophy 42 topics