Martini Philosophy 72 topics

Why 4-to-1 mapping? Why a limited number of particle types?

Subject	Replies / Views	Last Post
Masses of the beads in protein Topic started 2 years 7 months ago, by aishwarya Last Post 2 years 5 months ago by riccardo	Replies:1 Views:1632	Last Post by riccardo 2 years 5 months ago
Density of martini water Topic started 2 years 5 months ago, by yogi@martini Last Post 2 years 5 months ago by yogi@martini	Replies:2 Views:1678	Last Post by yogi@martini 2 years 5 months ago
Parametrizing a new molecule based on known fragments Topic started 2 years 8 months ago, by Hot Last Post 2 years 8 months ago by bart	Replies:5 Views:1435	Last Post by bart 2 years 8 months ago
Mapping of Benzene Ring Topic started 2 years 8 months ago, by Hot Last Post 2 years 8 months ago by Hot	Replies:2 Views:1969	Last Post by Hot 2 years 8 months ago
Polymer model building confusion Topic started 2 years 9 months ago, by Hot Last Post 2 years 9 months ago by Hot	Replies:0 Views:1378	Last Post by Hot 2 years 9 months ago
Bead division problem Topic started 2 years 9 months ago, by Hot Last Post 2 years 9 months ago by Hot	Replies:4 Views:1571	Last Post by Hot 2 years 9 months ago
Error in metadynamics run with plumed Topic started 2 years 9 months ago, by Imamul Last Post 2 years 9 months ago by riccardo	Replies:1 Views:1654	Last Post by riccardo 2 years 9 months ago
Martini Dielectric Constant Question Topic started 3 years 5 months ago, by nlogn Last Post 2 years 10 months ago by bond_007	Replies:6 Views:2260	Last Post by bond_007 2 years 10 months ago
Doubts about the operation of free energy technology-free sampling Topic started 2 years 11 months ago, by Hot Last Post 2 years 11 months ago by Hot	Replies:2 Views:1399	Last Post by Hot 2 years 11 months ago
No corresponding bead type can be found for the new molecule Topic started 3 years 1 week ago, by Hot Last Post 2 years 11 months ago by Hot	Replies:4 Views:1666	Last Post by Hot 2 years 11 months ago
Guess force constants for angles and dihedrals from AA simulations? Topic started 3 years 1 month ago, by rajgnu Last Post 3 years 1 month ago by bart	Replies:1 Views:78.7k	Last Post by bart 3 years 1 month ago
what is the column position if "ASP" is changed to "ASP0" in the itp file? Topic started 3 years 5 months ago, by lanselibai Last Post 3 years 4 months ago by peterkroon	Replies:4 Views:1580	Last Post by peterkroon 3 years 4 months ago
create sekundär struktur and limitation when not Topic started 3 years 11 months ago, by Newguy Last Post 3 years 11 months ago by Newguy	Replies:3 Views:1884	Last Post by Newguy 3 years 11 months ago
On Martini 3.0 release Topic started 4 years 5 days ago, by yogi@martini Last Post 4 years 5 days ago by yogi@martini	Replies:0 Views:3884	Last Post by yogi@martini 4 years 5 days ago
Matching bilayer thickness between AA and CG Topic started 4 years 4 months ago, by yogi@martini Last Post 4 years 4 months ago by yogi@martini	Replies:0 Views:2074	Last Post by yogi@martini 4 years 4 months ago
Reason for different number of bead assignment for same number of carbons Topic started 4 years 10 months ago, by nandhini1992 Last Post 4 years 9 months ago by jbarnoud	Replies:1 Views:2689	Last Post by jbarnoud 4 years 9 months ago
Box was shifted at least 10 times Topic started 4 years 11 months ago, by Imamul Last Post 4 years 11 months ago by Imamul	Replies:2 Views:2899	Last Post by Imamul 4 years 11 months ago
Coarse-graining of Gold nanoparticle (Au NP) Topic started 5 years 2 months ago, by Imamul Last Post 5 years 1 month ago by riccardo	Replies:3 Views:7504	Last Post by riccardo 5 years 1 month ago
ssd file Topic started 5 years 2 months ago, by roshanak Last Post 5 years 2 months ago by roshanak	Replies:0 Views:2675	Last Post by roshanak 5 years 2 months ago
How particle C1 and C2 are different in their interaction. Topic started 5 years 3 months ago, by yogi@martini Last Post 5 years 3 months ago by riccardo	Replies:1 Views:3887	Last Post by riccardo 5 years 3 months ago

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General Purpose Coarse-Grained Force Field

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Martini Philosophy 72 topics