General topics 763 topics

Category

Martini Philosophy 67 topics

Why 4-to-1 mapping? Why a limited number of particle types?
Martini 3: Bead Interactions a ...
by Luke Kruse
4 weeks 14 hours ago

Tools 270 topics

Scripts, programs and software to use with Martini simulations.
Re: Martinize: Charged Histidine i ...
by peter
21 hours 34 minutes ago

mdp Options 100 topics

Simulation parameters for Martini simulations.
PME parameters: Based on "New" ...
by peter
1 week 6 days ago

Other 157 topics

Everything that doesn't fit anywhere else.
Re: New Apple
by xavier
2 weeks 1 day ago

Tutorial 125 topics

Issues about the Martini tutorial
Re: The total potential energy is ...
by saini
1 week 6 days ago

Multiscaling 5 topics

Combining different levels of resolution.
Tabulated potentials
by almeida
10 months 1 week ago

Dry Martini 7 topics

Martini with implicit water.
Re: membrane folding using dry MAR ...
by CharlyE
1 year 4 months ago
Welcome to Martini 3's own little forum. Don't forget to post the relevant version number to the questions and/or remarks.
GoMartini issue
by aishwaryts
2 days 6 hours ago

Force Fields 428 topics

Category

Lipids 127 topics

Everything that has to do with the original Martini lipid forcefield.
Re: Clarifiaction about chlrophyll ...
by saini
1 month 1 week ago

Proteins 126 topics

Everything that has to do with the Martini extension for proteins and peptides.
Re: minimization not converged wit ...
by nanogod
2 weeks 4 hours ago

Sugars 6 topics

Everything concerning the Sweet Martini sugar extension.
Re: aggregation of proteins in pre ...
by riccardo
4 months 11 hours ago

Water 34 topics

Everything about water, since (almost) every biological system contains water.
Re: Water model for course-grained ...
by bart
1 month 4 days ago

Nucleotides 28 topics

Everything that has to do with the Martini extension to nucleotides.
martinize script for RNA with ...
by mandar
1 month 1 week ago

Other Molecules 107 topics

Any question about molecules that doesn't fit in the other forums? Post it here.
bond parameters/SASA optimizat ...
by fralav
4 days 21 hours ago
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