General topics 557 topics


Martini Philosophy 43 topics

Why 4-to-1 mapping? Why a limited number of particle types?
Re: Guess force constants for angl ...
by bart
2 weeks 1 day ago

Tools 198 topics

Scripts, programs and software to use with Martini simulations.
Re: Software inconsistency error:S ...
by riccardo
10 hours 50 minutes ago

mdp Options 79 topics

Simulation parameters for Martini simulations.
Re: Umbrella Sampling to calculate ...
by bart
3 weeks 2 days ago

Other 129 topics

Everything that doesn't fit anywhere else.
Re: How to build and equilibrate a ...
by Niels Johan Christensen
1 week 4 days ago

Tutorial 95 topics

Issues about the Martini tutorial
Re: "LINCS WARNING" for EINeDyn in ...
by Pim
3 months 2 weeks ago

Multiscaling 1 topic

Combining different levels of resolution.
Re: multiscaling
by riccardo
5 months 1 week ago

Dry Martini 7 topics

Martini with implicit water.
Re: make a lipid Bilayer
by bart
9 months 4 weeks ago
Welcome to Martini 3's own little forum. Don't forget to post the relevant version number to the questions and/or remarks.
Re: Terminal residues
by Raksha
3 months 1 week ago

Force Fields 350 topics


Lipids 107 topics

Everything that has to do with the original Martini lipid forcefield.
Re: 5-bead vs 4-bead models
by kevinboyd
3 weeks 3 days ago

Proteins 106 topics

Everything that has to do with the Martini extension for proteins and peptides.
Re: PEGylated protein
by fgrunewald
4 weeks 1 day ago

Sugars 3 topics

Everything concerning the Sweet Martini sugar extension.
Re: Sucrose monolaurate - MARTINI ...
by zidarko
7 months 2 weeks ago

Water 26 topics

Everything about water, since (almost) every biological system contains water.
Re: Polarizable water : LINCS warn ...
by peterkroon
7 months 1 day ago

Nucleotides 18 topics

Everything that has to do with the Martini extension to nucleotides.
Re: How to retain HETATM?
by peterkroon
2 months 3 days ago

Other Molecules 90 topics

Any question about molecules that doesn't fit in the other forums? Post it here.
Re: Modeling Fmoc
by Tomasz
1 month 2 weeks ago
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