General topics 541 topics


Martini Philosophy 40 topics

Why 4-to-1 mapping? Why a limited number of particle types?
Re: create sekundär struktur and l ...
by Newguy
5 months 2 weeks ago

Tools 193 topics

Scripts, programs and software to use with Martini simulations.
Re: Missing beads of Glycolipids: ...
by bart
1 day 14 hours ago

mdp Options 77 topics

Simulation parameters for Martini simulations.
Relative dielectric constant
by sk
2 months 1 week ago

Other 124 topics

Everything that doesn't fit anywhere else.
Re: Problem with mapping
by sot
1 month 1 day ago

Tutorial 95 topics

Issues about the Martini tutorial
"LINCS WARNING" for EINeDyn in ...
by lanselibai
1 day 9 hours ago

Multiscaling 1 topic

Combining different levels of resolution.
Re: multiscaling
by riccardo
1 month 5 days ago

Dry Martini 7 topics

Martini with implicit water.
Re: make a lipid Bilayer
by bart
5 months 3 weeks ago
Welcome to Martini 3's own little forum. Don't forget to post the relevant version number to the questions and/or remarks.
Re: Sugar models
by bart
3 months 4 weeks ago

Force Fields 343 topics


Lipids 106 topics

Everything that has to do with the original Martini lipid forcefield.
Re: PEGylated Lipid
by dariush
11 hours 59 minutes ago

Proteins 104 topics

Everything that has to do with the Martini extension for proteins and peptides.
How the pH is reflected in the ...
by lanselibai
1 day 8 hours ago

Sugars 3 topics

Everything concerning the Sweet Martini sugar extension.
Re: Sucrose monolaurate - MARTINI ...
by zidarko
3 months 1 week ago

Water 26 topics

Everything about water, since (almost) every biological system contains water.
Re: Polarizable water : LINCS warn ...
by peterkroon
2 months 3 weeks ago

Nucleotides 16 topics

Everything that has to do with the Martini extension to nucleotides.
Re: Problem generating RNA topolog ...
by ifaustino
5 months 2 days ago

Other Molecules 88 topics

Any question about molecules that doesn't fit in the other forums? Post it here.
Re: Parameterizing new molecule
by Pim
2 months 1 week ago
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