General topics 659 topics

Category

Martini Philosophy 59 topics

Why 4-to-1 mapping? Why a limited number of particle types?
Re: Density for octane incorrect e ...
by yogi@martini
2 weeks 3 days ago

Tools 233 topics

Scripts, programs and software to use with Martini simulations.
cg_bonds-v5.tcl (Error: file / ...
by Daisuke
2 hours 2 minutes ago

mdp Options 92 topics

Simulation parameters for Martini simulations.
LINCS error
by mw00847
1 week 2 days ago

Other 141 topics

Everything that doesn't fit anywhere else.
Re: Viewing MARTINI models with CO ...
by peterkroon
6 days 22 hours ago

Tutorial 111 topics

Issues about the Martini tutorial
Visualization using VMD (Self- ...
by Daisuke
1 day 5 hours ago

Multiscaling 4 topics

Combining different levels of resolution.
Re: Martini waters in the hybrid m ...
by p278107
1 month 1 week ago

Dry Martini 7 topics

Martini with implicit water.
Re: membrane folding using dry MAR ...
by CharlyE
1 month 2 weeks ago
Welcome to Martini 3's own little forum. Don't forget to post the relevant version number to the questions and/or remarks.
Martini 3.0 release?
by pela3247
2 months 1 week ago

Force Fields 389 topics

Category

Lipids 119 topics

Everything that has to do with the original Martini lipid forcefield.
Re: Viscosity of a surfactant mice ...
by realjun.zhou
1 month 1 week ago

Proteins 113 topics

Everything that has to do with the Martini extension for proteins and peptides.
Re: martinize.py problem
by peterkroon
6 days 22 hours ago

Sugars 4 topics

Everything concerning the Sweet Martini sugar extension.
Re: Covalently link glycan (NAG) g ...
by siladitya.padhi
1 month 1 week ago

Water 31 topics

Everything about water, since (almost) every biological system contains water.
Re: Yet another thread about LINCS ...
by riccardo
2 weeks 6 days ago

Nucleotides 25 topics

Everything that has to do with the Martini extension to nucleotides.
Re: Martini dsRNA tutorial setup c ...
by ibrahim
1 month 4 days ago

Other Molecules 97 topics

Any question about molecules that doesn't fit in the other forums? Post it here.
Re: Box burst when running NPT ens ...
by vainikka
1 month 3 days ago
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