General topics (513 topics)

Category

Martini Philosophy (40 topics)

Why 4-to-1 mapping? Why a limited number of particle types?
On Martini 3.0 release
by yogi@martini
2 weeks 5 days ago

Tools (180 topics)

Scripts, programs and software to use with Martini simulations.
Re: Difficulties in Visualization ...
by peterkroon
6 days 2 hours ago

mdp Options (74 topics)

Simulation parameters for Martini simulations.
Re: Wall parameters and pbc
by riccardo
1 week 5 days ago

Other (117 topics)

Everything that doesn't fit anywhere else.
Re: Martini 3.0 release?
by Pim
2 weeks 5 days ago

Tutorial (93 topics)

Issues about the Martini tutorial
Re: Mapping DPC with backward.py
by almeida
3 months 1 day ago

Multiscaling (1 topics)

Combining different levels of resolution.
Re: Bonds shifting while going fro ...
by peterkroon
1 year 3 months ago

Dry Martini (6 topics)

Martini with implicit water.
Re: Dry Martini aggregation
by peterkroon
1 year 9 months ago

Martini 3 open-beta (2 topics)

Welcome to Martini 3's own little forum. Don't forget to post the relevant version number to the questions and/or remarks.
Re: Protein NH2 capping at C-end
by meicher
6 days 8 hours ago

Force Fields (330 topics)

Category

Lipids (100 topics)

Everything that has to do with the original Martini lipid forcefield.
Re: DSPC vs DPPC
by dariush
16 hours 53 minutes ago

Proteins (102 topics)

Everything that has to do with the Martini extension for proteins and peptides.
Re: martinze adds one more atom to ...
by tfischb
6 days 23 hours ago

Sugars (2 topics)

Everything concerning the Sweet Martini sugar extension.
Re: parametes for guluronic acid r ...
by Clement
4 years 2 weeks ago

Water (26 topics)

Everything about water, since (almost) every biological system contains water.
Re: Convert atomistic water to MAR ...
by zidarko
4 days 5 hours ago

Nucleotides (15 topics)

Everything that has to do with the Martini extension to nucleotides.
Martini tutorials: DNA
by ChristinaL
1 year 2 months ago

Other Molecules (85 topics)

Any question about molecules that doesn't fit in the other forums? Post it here.
Re: Platinum bead
by riccardo
2 weeks 6 days ago
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