General topics (536 topics)


Martini Philosophy (40 topics)

Why 4-to-1 mapping? Why a limited number of particle types?
Re: create sekundär struktur and l ...
by Newguy
3 months 1 week ago

Tools (189 topics)

Scripts, programs and software to use with Martini simulations.
Re: Problem determining mapping co ...
by z.sichaib
5 days 5 hours ago

mdp Options (77 topics)

Simulation parameters for Martini simulations.
Relative dielectric constant
by sk
1 week 8 hours ago

Other (123 topics)

Everything that doesn't fit anywhere else.
Re: What is the best way to attach ...
by Imamul
1 week 6 days ago

Tutorial (95 topics)

Issues about the Martini tutorial
Re: NVT & NPT run for coarse grain ...
by molashahi
1 week 3 days ago

Multiscaling (1 topics)

Combining different levels of resolution.
Re: multiscaling
by peterkroon
1 day 12 hours ago

Dry Martini (7 topics)

Martini with implicit water.
Re: make a lipid Bilayer
by bart
3 months 2 weeks ago

Martini 3 open-beta (4 topics)

Welcome to Martini 3's own little forum. Don't forget to post the relevant version number to the questions and/or remarks.
Re: Sugar models
by bart
1 month 3 weeks ago

Force Fields (340 topics)


Lipids (104 topics)

Everything that has to do with the original Martini lipid forcefield.
Re: inconsistent topology in examp ...
by npokhrel
3 weeks 4 days ago

Proteins (103 topics)

Everything that has to do with the Martini extension for proteins and peptides.
Re: secondary structure number cod ...
by sxn
1 month 2 weeks ago

Sugars (3 topics)

Everything concerning the Sweet Martini sugar extension.
Re: Sucrose monolaurate - MARTINI ...
by zidarko
1 month 4 days ago

Water (26 topics)

Everything about water, since (almost) every biological system contains water.
Re: Polarizable water : LINCS warn ...
by molashahimaryam
3 weeks 15 hours ago

Nucleotides (16 topics)

Everything that has to do with the Martini extension to nucleotides.
Re: Problem generating RNA topolog ...
by ifaustino
2 months 4 weeks ago

Other Molecules (88 topics)

Any question about molecules that doesn't fit in the other forums? Post it here.
Re: Parameterizing new molecule
by Pim
1 week 2 days ago
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