Proteins 142 topics

Everything that has to do with the Martini extension for proteins and peptides.

Subject	Replies / Views	Last Post
Protein structure collapsing Topic started 2 months 3 days ago, by aabhatt Last Post 2 months 10 hours ago by aabhatt	Replies:3 Views:490	Last Post by aabhatt 2 months 10 hours ago
Martini3 polarizable water FF? Topic started 3 months 2 weeks ago, by ludad Last Post 3 months 2 weeks ago by ludad	Replies:0 Views:523	Last Post by ludad 3 months 2 weeks ago
Protein/Peptide staples Topic started 5 months 3 weeks ago, by kmcg Last Post 5 months 3 weeks ago by kmcg	Replies:0 Views:573	Last Post by kmcg 5 months 3 weeks ago
Fine tuning of an "active site" Topic started 6 months 2 weeks ago, by denniqo Last Post 6 months 2 weeks ago by denniqo	Replies:0 Views:400	Last Post by denniqo 6 months 2 weeks ago
Peptide expulsed from Bilayer Topic started 1 year 2 weeks ago, by Alvaro Last Post 1 year 2 weeks ago by Alvaro	Replies:0 Views:1446	Last Post by Alvaro 1 year 2 weeks ago
phosphorylated serine Topic started 1 year 7 months ago, by htsurui Last Post 1 year 7 months ago by htsurui	Replies:2 Views:1910	Last Post by htsurui 1 year 7 months ago
Structure file generation for PEGylated oligopeptides with Martini3 Topic started 1 year 7 months ago, by antabear Last Post 1 year 7 months ago by antabear	Replies:4 Views:852	Last Post by antabear 1 year 7 months ago
Protonation in Martini3/martinize2 Topic started 1 year 8 months ago, by liguo_UCAS Last Post 1 year 8 months ago by liguo_UCAS	Replies:1 Views:768	Last Post by liguo_UCAS 1 year 8 months ago
Uncharged Lysine in MARTINI3 Topic started 2 years 11 months ago, by rapha.v Last Post 1 year 8 months ago by liguo_UCAS	Replies:1 Views:1517	Last Post by liguo_UCAS 1 year 8 months ago
elnedyn vs elnedynp Topic started 1 year 9 months ago, by CMM Last Post 1 year 9 months ago by CMM	Replies:0 Views:1036	Last Post by CMM 1 year 9 months ago
Histidine Protonation with elnedyn22 Topic started 8 years 7 months ago, by Samuel Last Post 1 year 11 months ago by qiaobf	Replies:1 Views:4515	Last Post by qiaobf 1 year 11 months ago
Martini bead size vs equilibrium bond lengths for amino acids residues Topic started 1 year 11 months ago, by subha Last Post 1 year 11 months ago by subha	Replies:0 Views:964	Last Post by subha 1 year 11 months ago
Martini 2.1P does not have "D" polarisable particles Topic started 2 years 2 months ago, by Kusay Last Post 2 years 2 months ago by Kusay	Replies:0 Views:1340	Last Post by Kusay 2 years 2 months ago
protein coarse grain model quality check Topic started 2 years 2 months ago, by tanvipar123 Last Post 2 years 2 months ago by riccardo	Replies:1 Views:987	Last Post by riccardo 2 years 2 months ago
Disulfide bridges Topic started 2 years 2 months ago, by julybel Last Post 2 years 2 months ago by julybel	Replies:0 Views:1081	Last Post by julybel 2 years 2 months ago
Problem in minimizing protein/bilayer system Topic started 2 years 4 months ago, by abhinavsri89 Last Post 2 years 4 months ago by abhinavsri89	Replies:0 Views:1409	Last Post by abhinavsri89 2 years 4 months ago
Problem with Martini3 md run crash due to lincs warning in protein Topic started 2 years 5 months ago, by nanogod Last Post 2 years 4 months ago by riccardo	Replies:1 Views:1629	Last Post by riccardo 2 years 4 months ago
Protein coming out from box in a lipid-protein system Topic started 2 years 4 months ago, by ROY Last Post 2 years 4 months ago by ROY	Replies:0 Views:1132	Last Post by ROY 2 years 4 months ago
minimization not converged with charged termini Topic started 2 years 6 months ago, by nanogod Last Post 2 years 6 months ago by nanogod	Replies:1 Views:1574	Last Post by nanogod 2 years 6 months ago
Protocol for determination of monomers Topic started 2 years 6 months ago, by JBinder Last Post 2 years 6 months ago by JBinder	Replies:0 Views:1115	Last Post by JBinder 2 years 6 months ago

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Proteins 142 topics