mdp Options 107 topics

Simulation parameters for Martini simulations.

Subject	Replies / Views	Last Post
lipid bilayer minimization Topic started 10 years 4 months ago, by ipsita Last Post 10 years 4 months ago by Clement	Replies:8 Views:5327	Last Post by Clement 10 years 4 months ago
How important is nstlist=1, instead of nstlist=10? Topic started 10 years 6 months ago, by Rajat Desikan Last Post 10 years 5 months ago by siewert	Replies:6 Views:6478	Last Post by siewert 10 years 5 months ago
Protein in water using Elnedyn Topic started 10 years 11 months ago, by bt12d026 Last Post 10 years 6 months ago by Rajat Desikan 1 2 3	Replies:51 Views:27.3k	Last Post by Rajat Desikan 10 years 6 months ago
Self-Assembly: different pressure control Topic started 10 years 8 months ago, by mferraro Last Post 10 years 8 months ago by mferraro	Replies:2 Views:3555	Last Post by mferraro 10 years 8 months ago
md wall parameters Topic started 10 years 11 months ago, by nanogod Last Post 10 years 11 months ago by xavier	Replies:1 Views:3543	Last Post by xavier 10 years 11 months ago
Domain decomposition error Topic started 11 years 19 hours ago, by bt12d026 Last Post 10 years 11 months ago by bt12d026	Replies:2 Views:3913	Last Post by bt12d026 10 years 11 months ago
Simulated annealing error Topic started 11 years 2 weeks ago, by bt12d026 Last Post 11 years 2 weeks ago by djurre	Replies:1 Views:3963	Last Post by djurre 11 years 2 weeks ago
sample.mdp file for making input.tpr file in using g_membed Topic started 11 years 3 months ago, by thu nguyen Last Post 11 years 2 months ago by xavier	Replies:2 Views:4599	Last Post by xavier 11 years 2 months ago
Note while doing energy minimization Topic started 11 years 3 months ago, by anuvc84 Last Post 11 years 3 months ago by djurre	Replies:1 Views:4226	Last Post by djurre 11 years 3 months ago
MARTINI compatibility with Verlet cut-off scheme Topic started 11 years 4 months ago, by kmcallenberg Last Post 11 years 4 months ago by djurre	Replies:3 Views:5751	Last Post by djurre 11 years 4 months ago
NVT MD works but not NPT MD (domain decomposition error) Topic started 11 years 5 months ago, by payel Last Post 11 years 5 months ago by djurre	Replies:5 Views:6719	Last Post by djurre 11 years 5 months ago
An error with rdd Topic started 11 years 5 months ago, by dujiangfeng Last Post 11 years 5 months ago by xavier	Replies:1 Views:3995	Last Post by xavier 11 years 5 months ago
mdp update from gromacs 3 to gromacs 4 Topic started 13 years 7 months ago, by Jian Last Post 11 years 6 months ago by richor	Replies:4 Views:4990	Last Post by richor 11 years 6 months ago
How sensitive of a simulaiton code it is? Topic started 11 years 7 months ago, by dujiangfeng Last Post 11 years 7 months ago by xavier	Replies:3 Views:4538	Last Post by xavier 11 years 7 months ago
Reverse Transformation Topic started 11 years 7 months ago, by nivedita Last Post 11 years 7 months ago by floris	Replies:3 Views:4005	Last Post by floris 11 years 7 months ago
md simulation code Topic started 11 years 8 months ago, by dujiangfeng Last Post 11 years 7 months ago by dujiangfeng 1 2	Replies:23 Views:13.4k	Last Post by dujiangfeng 11 years 7 months ago
Segmentation Fault during PR run Topic started 11 years 9 months ago, by think_beyond Last Post 11 years 8 months ago by djurre	Replies:3 Views:4356	Last Post by djurre 11 years 8 months ago
Reverse Transformation mdp file Topic started 11 years 11 months ago, by anna_duncan Last Post 11 years 10 months ago by jantunes	Replies:1 Views:3522	Last Post by jantunes 11 years 10 months ago
Ask about thermostat and pressure coupling Topic started 11 years 11 months ago, by yongle Last Post 11 years 11 months ago by yongle	Replies:2 Views:4453	Last Post by yongle 11 years 11 months ago
PME parameters Topic started 12 years 1 month ago, by joshua_roc Last Post 11 years 11 months ago by xavier	Replies:4 Views:5968	Last Post by xavier 11 years 11 months ago

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General Purpose Coarse-Grained Force Field

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mdp Options 107 topics