New lipid topology website
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- Last Updated: Wednesday, 12 August 2015 10:04
We just opened a new Martini lipid webpage, with even more lipids and supporting files. See for yourself here.
We just opened a new Martini lipid webpage, with even more lipids and supporting files. See for yourself here.
The Insane Paper is out. Read about the background, the philosophy and features.
T.A. Wassenaar, H.I. Ingólfsson, R.A. Böckmann, D.P. Tieleman, S.J. Marrink. Computational lipidomics with insane: a versatile tool for generating custom membranes for molecular simulations. JCTC, 11:2144–2155, 2015. doi: 10.1021/acs.jctc.5b00209 abstract
Setting up and running many association simulation is now easier than ever. Check out the new tool here and find the paper here.
T.A. Wassenaar, K. Pluhackova, A. Moussatova, D. Sengupta, S.J. Marrink, D.P. Tieleman, R.A. Böckmann. High-throughput simulations of dimer and trimer assembly of membrane proteins. The DAFT approach. JCTC, 11:2278–2291, 2015. DOI: 10.1021/ct5010092 abstract
Are you impressed by the interesting science done by using the Martini coarse-grained model, and do you want to hear from the developers about the philosophy, back-ground, current, and future developments of Martini? Moreover, do you want to practice coarse-graining skills under the guidance of Martini experts? The Martini summerschool is the place for you!
REGISTRATION IS NOW CLOSED - WE ARE FULL!
Read more: Announcing the 2015 Martini Coarse-Graining Workshop
F.J. van Eerden, D.H. de Jong, A.H. de Vries, T. A. Wassenaar, S.J. Marrink. Characterization of thylakoid lipid membranes from cyanobacteria and higher plants by molecular dynamics simulations. BBA-Biomembranes, 1848:1319–1330, 2015. DOI:10.1016/j.bbamem.2015.02.025
Interested in creating your own thylakoids? Get the starterkit!
There is a PhD position available at the MD group on Multiscale Modeling of Self-Assembled Molecular Nanotubes. For details see the announcement.