New tools

ct1c00295_0009.gifct1c00322_0015.gifNew Martini tools are popping up like snails in my backyard, with the difference that the tools are welcome additions whereas the snails are not.

Check these papers for an updated backmapping tool from the Stansfeld group, and a brand new ATB from Miller and coworkers.

Martini workshop 2021

TAs.gif

GroupPhoto.gif

The Martini workshop was a great success - thanks to all who contributed to the meeting. The gather town setting made us feel like we were actually interacting with each other, and the cocktails at the bar almost tasted real. We are already thinking about another such meeting during winter time, but of course hope to welcome you in Groningen for an onsite meeting in due time !

Temperature gradients

jp1c03665_0008.gif

 

Be careful simulating membranes containing cholesterol to avoid temperature gradients developing. Read how to handle these systems in the publication that just appeared in JPCB, by Thallmair et al.: https://pubs.acs.org/doi/full/10.1021/acs.jpcb.1c03665

Molecular Postman

molecular postman oil paintings.png

Together with researchers from Utrecht University, we have been able to visualize the 'molecular postman' that delivers important proteins, like antibodies and some hormones, to the outside of the cell. The research is published today in Molecular Cell: https://authors.elsevier.com/c/1dZX53vVUPGKEs

Martini workshop 2021

Martini 3.0 online workshop - 1-3 September 2021. 
 
We are happy to announce the next Martini workshop, which will take place online as traveling options are still limited. The three day workshop will consist of a number of pre-recorded lectures and associated Q&A session by some of the key Martini developers, as well as dedicated tutorial sessions where students can practice both basic and advanced Martini simulations under the guidance of expertised assistants. Topics we will cover include, of course, the ins and outs of the latest Martini version, Martini 3.0, and the growing list of associated tools and methods such as martinize2, insane, backwards, TS2CG, polyply, titratable Martini and the Martini database.
Registration for the event is now closed!
 
Looking forward to meeting you online !
Paulo, Manuel, & Siewert-Jan
(for further questions, please contact Paulo at This email address is being protected from spambots. You need JavaScript enabled to view it.)